# Items where Division is "Engineering & Applied Sciences > Systems analytics research institute (SARI)" and Year is 2008

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**64**.

## A

Alamino, Roberto C. and Caticha, Nestor
(2008).
Bayesian online algorithms for learning in discrete Hidden Markov Models.
*Discrete and Dontinuous Dynamical Systems: Series B*, 9
(1),
pp. 1-10.

Alamino, Roberto C. and Saad, David
(2008).
Typical kernel size and number of sparse random matrices over Galois fields: a statistical physics approach.
*Physical Review E*, 77
(6),
pp. 1-12.

Alamino, Roberto C. and Saad, David
(2008).
*Typical performance of generalised vector channels.*
IN: Proceedings of the 6th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, WiOpt 2008.
DEU: IEEE.

Andrle, Miroslav and Rebollo-neira, Laura
(2008).
From cardinal spline wavelet bases to highly coherent dictionaries.
*Journal of Physics A: Mathematical and Theoretical*, 41
(17),

Ania-Castañón, Juan D., Karalekas, Vassileios, Harper, Paul and Turitsyn, Sergei
(2008).
Simultaneous spatial and spectral transparency in ultralong fiber lasers.
*Physical Review Letters*, 101
(12),

Ania-Castañón, Juan D. and Turitsyn, Sergei
(2008).
Unrepeatered transmission through ultra-long fiber laser cavities.
*Optics Communications*, 281
(23),
5760–5763.

Archambeau, Cédric, Opper, Manfred, Shen, Yuan, Cornford, Dan and Shawe-Taylor, John
(2008).
*Variational inference for diffusion processes.*
IN: Annual Conference on Neural Information Processing Systems 2007.
Platt, J.C.; Koller, D.; Singer, Y. and Roweis, S. (eds)
Advances In Neural Information Processing Systems
.
CAN: MIT.

## B

Babin, S.A., Karalekas, V., Podivilov, E.V., Mezentsev, Vladimir, Harper, Paul, Ania-Castañón, Juan D. and Turitsyn, Sergei K.
(2008).
Turbulent broadening of optical spectra in ultralong Raman fiber lasers.
*Physical Review A*, 77
(3),
033803.

Babin, Sergei A., Karalekas, Vassileios, Podivilov, E.V., Mezentsev, Vladimir K., Harper, Paul, Ania-Castañón, Juan D. and Turitsyn, Sergei K.
(2008).
*Characterization of ultra-long Raman fibre lasers.*
IN: Fiber lasers V.
Broeng, Jes and Headley, Clifford (eds)
USA: SPIE.

Boscolo, Sonia A., Latkin, Anton I. and Turitsyn, Sergei K.
(2008).
Passive nonlinear pulse shaping in normally dispersive fiber systems.
*IEEE Journal of Quantum Electronics*, 44
(12),
pp. 1196-1203.

Boscolo, Sonia, Turitsyn, Sergei and Blow, Keith
(2008).
Nonlinear loop mirror-based all-optical signal processing in fiber-optic communications.
*Optical Fiber Technology*, 14
(4),
pp. 299-316.

Busse, F.H.
(2008).
Asymptotic theory of wall-attached convection in a horizontal fluid layer with a vertical magnetic field.
*Physics of Fluids*, 20
(2),

Busse, F.H. and Simitev, R.D.
(2008).
Toroidal flux oscillation as possible cause of geomagnetic excursions and reversals.
*Physics of the Earth and Planetary Interiors*, 168
(3-4),
pp. 237-243.

Buts, V.A., Nerukh, A.G., Ruzhytska, N.N. and Nerukh, Dmitry
(2008).
Wave chaotic behaviour generated by linear systems.
*Optical and Quantum Electronics*, 40
(8),
pp. 587-601.

## C

Cartland Glover, Gregory and Generalis, Sotos C.
(2008).
*Pattern competition in homogeneously heated fluid layers.*
IN: Eurotherm 2008.
Stoffels, G.M.M.; van der Meer, T.H. and van Steenhoven, A.A. (eds)
NLD: Eindhoven University of Technology.

Chapko, R. and Johansson, B.T.
(2008).
An alternating potential based approach for a Cauchy problem for the Laplace equation in a planar domain with a cut.
*Computational Methods in Applied Mathematics*, 8
(4),
pp. 315-335.

## D

D'Alimonte, Davide and Cornford, Dan
(2008).
Outlier detection with partial information:Application to emergency mapping.
*Stochastic environmental research and risk assessment*, 22
(5),
pp. 613-620.

Derevyanko, Stanislav
(2008).
Design of a flat-top fiber Bragg filter via quasi-random modulation of the refractive index.
*Optics Letters*, 33
(20),
pp. 2404-2406.

Derevyanko, Stanislav
(2008).
The (n+1)/2 rule for dealiasing in the split-step Fourier methods for n-wave interactions.
*IEEE Photonics Technology Letters*, 20
(23),
pp. 1929-1931.

Derevyanko, Stanislav, Falkovich, Gregory and Turitsyn, Sergei
(2008).
Evolution of non-uniformly seeded warm clouds in idealized turbulent conditions.
*New Journal of Physics*, 10
,

## G

Generalis, Sotos C. and Busse, Friedrich
(2008).
*Transition in inclined internally heated fluid layers.*
IN: Proceedings 5th European Thermal-Sciences Conference.
Stoffels, G.G.M.; van der Meer, T.H. and van Steenhoven, A.A. (eds)
Eindhoven (NL): Eindhoven University of Technology.

Generalis, Sotos C. and Fujimura, Kaoru
(2008).
*Range of validity of weakly non-linear theory in Rayleigh-Bénard convection.*
IN: Proceedings 5th European Thermal-Sciences Conference.
Stoffels, G.G.M.; van der Meer, T.H. and van Steenhoven, A.A. (eds)
Eindhoven (NL): Eindhoven University of Technology.

Goldingay, Harry and van Mourik, Jort
(2008).
*Genetics and competing strategies in a threshold model for mail processing.*
Technical Report.
Aston University, Birmingham.

Goldingay, Harry and van Mourik, Jort
(2008).
*The influence of memory in a threshold model for distributed task assignment.*
IN: SASO '08: 2008 Second IEEE International Conference on Self-Adaptive and Self-Organizing Systems.
Washington (US): IEEE.

Goldsby, Heather J., Sawyer, Peter, Bencomo, Nelly, Hughes, Daniel and Cheng, Betty H.C.
(2008).
*Goal-based modeling of dynamically adaptive system requirements.*
IN: 15th Annual IEEE International Conference and Workshop on the Engineering of Computer Based Systems, 2008. ECBS 2008.
GBR: IEEE.

## H

He, Yulan, Nakata, Keiichi and Zhou, Deyu
(2008).
*Ontology-based protein-protein interactions extraction from literature using the hidden vector state model.*
IN: 2008 IEEE international conference on data mining workshops.
ITA: IEEE.

Herzallah, Randa and Lowe, David
(2008).
A Bayesian perspective on stochastic neurocontrol.
*IEEE Transactions on Neural Networks and Learning Systems*, 19
(5),
pp. 914-924.

## I

Ingram, Benjamin R. and Cornford, Dan
(2008).
*Parallel geostatistics for sparse and dense datasets.*
IN: geoENV VII – Geostatistics for Environmental Applications.
Springer.

Ingram, Benjamin R., Cornford, Dan and Evans, David J.
(2008).
Fast algorithms for automatic mapping with space-limited covariance functions.
*Stochastic environmental research and risk assessment*, 22
(5),
pp. 661-670.

Itano, Tomoaki, Akinaga, Takeshi and Sugihara-Seki, Masako
(2008).
Molecular dynamics study of solvent transport in nanoscale osmosis.
*Journal of Physical Society of Japan*, 77
(6),

## J

Jensen, Christian H., Nerukh, Dmitry and Glen, Robert C.
(2008).
Controlling protein molecular dynamics:how to accelerate folding while preserving the native state.
*Journal of Chemical Physics*, 129
(22),

Jensen, Christian H., Nerukh, Dmitry and Glen, Robert C.
(2008).
Sensitivity of peptide conformational dynamics on clustering of a classical molecular dynamics trajectory.
*Journal of Chemical Physics*, 128
(11),

## K

Kanter , Ido
(2008).
*Spread-spectrum transmission in which not all chips are transmitted.*
H04B1/707.

Kovalev, A.S., Prilepsky, Jaroslaw E., Gredeskul, Sergey A. and Derevyanko, Stanislav
(2008).
Soliton transmission through a disordered system.
*Low Temperature Physics*, 34
(7),
pp. 559-563.

Krepper, Eckhard, Cartland-Glover, Gregory, Grahn, Alexander, Weiss, Frank-Peter, Alt, Sören, Hampel, Rainer, Kästner, Wolfgang and Seeliger, Andrè
(2008).
*CFD-modeling and Experiments of insulation debris transport phenomena in water flow.*
IN: Computational Fluid Dynamics (CFD) in Nuclear Reactor Safety (NRS).
FRA: Nuclear Energy Agency.

## L

Lamichhane, Bishnu and Rebollo - Neira, Laura
(2008).
*Projection and interpolation based techniques for structured and impulsive noise filtering.*
IN: New Signal Processing Research.
Maeda, Takumi (ed.)
Nova science.

Latkin, Anton I., Boscolo, Sonia, Bhamber, Ranjeet and Turitsyn, Sergei K.
(2008).
Optical signal copying by cross-phase modulation with triangular pulses.
IN: *3rd EPS-QEOD Europhoton Conference on Solid-state, Fiber and Waveguided Light Sources*. 2008-08-31 - 2008-09-05.

Lerner, Igor V., Yudson, Vladimir I. and Yurkevich, Igor
(2008).
Quantum wire hybridized with a single-level impurity.
*Physical Review Letters*, 100
(25),

Lerner, Igor V., Yurkevich, Igor, Stepanenko, Alexander and Constantinou, Constantinos
(2008).
*Loss fluctuations and temporal correlations in network queues.*
IN: 6th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks and Workshops, 2008 (WiOPT 2008).
DEU: IEEE.

## M

Mallard, Etienne and Saad, David
(2008).
Inference by belief propagation in composite systems.
*Physical Review E*, 78
(2),
021107.

## N

Nerukh, D.
(2008).
Computational mechanics reveals nanosecond time correlations in molecular dynamics of liquid systems.
*Chemical Physics Letters*, 457
(4-6),
pp. 439-443.

Nerukh, Dmitry, Ryabov, Vladimir and Glen, Robert C.
(2008).
Complex temporal patterns in molecular dynamics:a direct measure of the phase-space exploration by the trajectory at macroscopic time scales.
*Physical Review E*, 77
(3),

Nesterov, Maxim L., Kats, Alexandre V. and Turitsyn, Sergei K.
(2008).
Extremely short-length surface plasmon resonance devices.
*Optics Express*, 16
(25),
pp. 20227-20240.

Nguyen, Hang T. and Nabney, Ian T.
(2008).
*Combining the wavelet transform and forecasting models to predict gas forward prices.*
IN: Seventh International Conference on Machine Learning and Applications, 2008. ICMLA '08.
IEEE.

## P

Pebesma, Edzer J., Dubois, Gregoire and Cornford, Dan
(2008).
*The challenge of real-time automatic mapping for environmental monitoring network management.*
IN: geoENV VI – Geostatistics for Environmental Applications Proceedings of the Sixth European Conference on Geostatistics for Environmental Applications.
Springer.

Punckt, Christian, Stich, Michael, Beta, Carsten and Rotermund, Harm Hinrich
(2008).
Suppression of spatiotemporal chaos in the oscillatory CO oxidation on Pt(110) by focused laser light.
*Physical Review E*, 77
(4),

## S

Schroeder, Martin, Nabney, Ian T. and Cornford, Dan
(2008).
*Block GTM: Incorporating prior knowledge of covariance structure in data visualisation.*
Technical Report.
Aston University, Birmingham.

Sivaraksa, Mingmanas and Lowe, David
(2008).
Predictive gene lists for breast cancer prognosis: a topographic visualisation study.
*BMC Medical Genomics*, 1
(1),
pp. 1-8.

Stepanenko, Alexander S., Constantinou, Costas C., Yurkevich, Igor V. and Lerner, Igor V.
(2008).
Temporal correlations of local network losses.
*Physical Review E*, 77
(4),

Stich, Michael, Briones, Carlos and Manrubia, Susanna C.
(2008).
On the structural repertoire of pools of short, random RNA sequences.
*Journal of Theoretical Biology*, 252
(4),
pp. 750-763.

Sugihara-Seki, Masako, Akinaga, Takeshi and Itano, Tomoaki
(2008).
Flow across microvessel walls through the endothelial surface glycocalyx and the interendothelial cleft.
*Journal of Fluid Mechanics*, 601
,
pp. 229-252.

## T

Turitsyn, Sergei K. and Derevyanko, Stanislav
(2008).
Soliton-based discriminator of noncoherent optical pulses.
*Physical Review A*, 78
(6),
063819.

Turitsyn , Sergei
(2008).
*Secure communication method.*
H04L9/08.

## V

Vrettas, Michail D., Shen, Yuan and Cornford, Dan
(2008).
*Derivations of variational gaussian process approximation framework.*
Technical Report.
Aston University, Birmingham.

Vuong, Ba-Quy, Hui, Siu C. and He, Yulan
(2008).
Progressive structural analysis for dynamic recognition of on-line handwritten mathematical expressions.
*Pattern Recognition Letters*, 29
(5),
pp. 647-655.

## W

Whittle, Jon, Sawyer, Peter, Bencomo, Nelly and Cheng, Betty
(2008).
*A language for self-adaptive system requirements.*
IN: International Workshop on Service-Oriented Computing: Consequences for Engineering Requirements, 2008. SOCCER '08.
ESP: IEEE.

Williams, Matthew, Cornford, Dan, Bastin, Lucy and Ingram, Ben
(2008).
*Describing and communicating uncertainty within the semantic web.*
IN: Proceedings of the Fourth International Workshop on Uncertainty Reasoning for the Semantic Web.
Bobillo, Fernando; da Costa, Paulo C.G. and et al (eds)
CEUR Workshop Proceedings
.
DNK: CEUR-WS.org.

Williams, Matthew, Cornford, Dan, Bastin, Lucy and Ingram, Benjamin R.
(2008).
*Exchanging uncertainty: interoperable geostatistics?*
IN: geoENV VII – Geostatistics for Environmental Applications.
Springer.

Wong, K.Y. Michael and Saad, David
(2008).
Minimizing unsatisfaction in colourful neighbourhoods.
*Journal of Physics A: Mathematical and General*, 41
(32),
p. 324023.

Wong, K.Y. Michael, Saad, David and Yeung, C.H.
(2008).
*Network optimisation - A statistical physics perspective.*
IN: Proceedings of the 6th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, WiOpt 2008.
DEU: IEEE.

## Y

Yano, Toru, Tanaka, Toshiyuki and Saad, David
(2008).
A mean field theory of coded CDMA systems.
*Journal of Physics A: Mathematical and General*, 41
(32),
p. 324022.

## Z

Zhou, Deyu and He, Yulan
(2008).
Extracting interactions between proteins from the literature.
*Journal of Biomedical Informatics*, 41
(2),
pp. 393-407.

Zhou, Deyu and He, Yulan
(2008).
*A hybrid generative/discriminative framework to train a semantic parser from an un-annotated corpus.*
IN: COLING '08.
Scott, Donia and Uszkoreit, Hans (eds)
Stroudsburg, PA (US): Association for Computational Linguistics.

Zhou, Deyu, He, Yulan and Kwoh, Chee K.
(2008).
Extracting protein-protein interactions from MEDLINE using the hidden vector state model.
*International Journal of Bioinformatics Research and Applications*, 4
(1),
pp. 64-80.