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Cavadas, Miguel A.S.; Mesnieres, Marion; Crifo, Bianca; Manresa, Mario C.; Selfridge, Andrew C.; Keogh, Ciara E.; Fabian, Zsolt; Scholz, Carsten C.; Nolan, Karen A.; Rocha, Liliane M.A.; Tambuwala, Murtaza M.; Brown, Stuart; Wdowicz, Anita; Corbett, Danielle; Murphy, Keith J.; Godson, Catherine; Cummins, Eoin P.; Taylor, Cormac T. and Cheong, Alex (2016). REST is a hypoxia-responsive transcriptional repressor. Scientific Reports, 6 ,

Frank, Till D.; Kiyatkin, Anatoly; Cheong, Alex and Kholodenko, Boris N. (2016). Three-factor models versus time series models:quantifying time-dependencies of interactions between stimuli in cell biology and psychobiology for short longitudinal data. Mathematical Medicine and Biology, First ,

Cavadas, Miguel A.S.; Mesnieres, Marion; Crifo, Bianca; Manresa, Mario C.; Selfridge, Andrew C.; Scholz, Carsten C.; Cummins, Eoin P.; Cheong, Alex and Taylor, Cormac T. (2015). REST mediates resolution of HIF-dependent gene expression in prolonged hypoxia. Scientific Reports, 5 ,

Nguyen, Lan K.; Cavadas, Miguel A.S.; Kholodenko, Boris N.; Frank, Till D. and Cheong, Alex (2015). Species differential regulation of COX2 can be described by an NFκB-dependent logic AND gate. Cellular and Molecular Life Sciences, 72 (12), pp. 2431-2443.

Nguyen, Lan K.; Cavadas, Miguel A.S.; Scholz, Carsten C.; Fitzpatrick, Susan F.; Bruning, Ulrike; Cummins, Eoin P.; Tambuwala, Murtaza M.; Manresa, Mario C.; Kholodenko, Boris N.; Taylor, Cormac T. and Cheong, Alex (2013). A dynamic model of the hypoxia-inducible factor 1α (HIF-1α) network. Journal of Cell Science, 126 (6), pp. 1454-1463.

Bruning, Ulrike; Cerone, Luca; Neufeld, Zoltan; Fitzpatrick, Susan F.; Cheong, Alex; Scholz, Carsten C.; Simpson, David A.; Leonard, Martin O.; Tambuwala, Murtaza M.; Cummins, Eoin P. and Taylor, Cormac T. (2011). MicroRNA-155 promotes resolution of hypoxia-inducible factor 1α activity during prolonged hypoxia. Molecular and Cellular Biology, 31 (19), pp. 4087-4096.

Cheong, Alex; Li, Jing; Sukumar, Piruthivi; Kumar, Bhaskar; Zeng, Fanning; Riches, Kirsten; Munsch, Christopher; Wood, Ian C.; Porter, Karen E. and Beech, David J. (2011). Potent suppression of vascular smooth muscle cell migration and human neointimal hyperplasia by KV1.3 channel blockers. Cardiovascular Research, 89 (2), pp. 282-289.

Frank, Till D.; Cheong, Alex; Okada-Hatakeyama, Mariko and Kholodenko, Boris N. Catching transcriptional regulation by thermostatistical modeling. Physical Biology, 9 (4),

Manresa, Mario Cabrero; Tambuwala, Murtaza M.; Rhadakrishnan, Praveen; Harnoss, Jonathan M.; Brown, Eric; Cavadas, Miguel A.; Keogh, Ciara E.; Cheong, Alex; Barrett, Kim E.; Cummins, Eoin P.; Schneider, Martin and Taylor, Cormac T. Hydroxylases regulate intestinal fibrosis through the suppression of ERK mediated TGF-β1 signaling. Gastrointestinal and Liver Physiology, Early ,

Oliver, Kathryn M.; Lenihan, Colin R.; Bruning, Ulrike; Cheong, Alex; Laffey, John G.; McLoughlin, Paul; Taylor, Cormac T. and Cummins, Eoin P. Hypercapnia induces cleavage and nuclear localization of RelB protein, giving insight into CO2 sensing and signaling. Journal of Biological Chemistry, 287 (17), pp. 14004-14011.

Cavadas, Miguel A.S.; Nguyen, Lan K. and Cheong, Alex Hypoxia-inducible factor (HIF) network:insights from mathematical models. Cell Communication and Signaling, 11 (1),

Dobrzyński, Maciej; Nguyen, Lan K.; Birtwistle, Marc R.; von Kriegsheim, Alexander; Fernández, Alfonso Blanco; Cheong, Alex; Kolch, Walter and Kholodenko, Boris N. Nonlinear signalling networks and cell-to-cell variability transform external signals into broadly distributed or bimodal responses. Journal of the Royal Society Interface, 11 (98),

Scholz, Carsten C.; Cavadas, Miguel A.S.; Tambuwala, Murtaza M.; Hams, Emily; Rodríguez, Javier; von Kriegsheim, Alexander; Cotter, Philip; Bruning, Ulrike; Fallon, Padraic G.; Cheong, Alex; Cummins, Eoin P. and Taylor, Cormac T. Regulation of IL-1β-induced NFκB by hydroxylases links key hypoxic and inflammatory signaling pathways. Proceedings of the National Academy of Sciences, 110 (46), pp. 18490-18495.

Agbor, Terence A.; Cheong, Alex; Comerford, Katrina M.; Scholz, Carsten C.; Bruning, Ulrike; Clarke, Ambrose; Cummins, Eoin P.; Cagney, Gerard and Taylor, Cormac T. Small Ubiquitin-related Modifier (SUMO)-1 promotes glycolysis in hypoxia. Journal of Biological Chemistry, 286 (6), pp. 4718-4726.

Cavadas, Miguel A.S.; Cheong, Alex and Taylor, Cormac T. The regulation of transcriptional repression in hypoxia. Experimental Cell Research, In pre ,

Book Section

Cavadas, Miguel A.S.; Taylor, Cormac T. and Cheong, Alex (2018). Acquisition of temporal HIF transcriptional activity using a secreted luciferase assay. IN: Methods in Molecular Biology. Methods in Molecular Biology, 1742 . Humana Press.

Cavadas, Miguel A.S. and Cheong, Alex Monitoring of transcriptional dynamics of HIF and NFκB activities. IN: Bioluminescent imaging. Badr, Christian E. (ed.) Methods in molecular biology . Humana Press.